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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811787.1_cds_XP_016496870.1_11051
CDS Infomation

[gene=LOC107815753] [db_xref=GeneID:107815753] [protein=protoporphyrinogen oxidase, mitochondrial] [protein_id=XP_016496870.1] [location=join(40617..40647,40740..40779,41733..41868,41992..42057,42236..42286,42414..42470,43418..43488,44249..44285,44424..44489,44733..44773,45052..45184,45651..45830,46003..46077,46424..46547,46627..46735,46842..46916,47018..47124,49392..49507)] [gbkey=CDS]
Sequence

ATGGCTCCTTCTGCCGGAGAAGATAAACACAGTTCTGCGAAGAGAGTCGCAGTCATTGGT
GCAGGCGTCAGTGGGCTTGCTGCAGCATACAAGTTGAAAATCCATGGCTTGAATGTGACA
GTATTTGAAGCAGAAGGGAAAGCTGGAGGGAAGTTACGTAGCGTGAGCCAAGATGGCCTG
ATATGGGATGAAGGGGCAAATACTATGACTGAAAGTGAAGGTGATGTTACATTTTTGATT
GATTCTCTTGGACTCCGAGAAAAGCAACAATTTCCACTTTCACAAAACAAGCGCTACATT
GCCAGAAATGGTACTCCTGTACTGTTACCTTCAAATCCAATTGATCTGATCAAAAGCAAT
TTTCTTTCCACTGGATCAAAGCTTCAGATGCTTCTGGAACCAATATTATGGAAGAATAAA
AAGCTCTCCCAGGTGTCTGACTCACATGAAAGTGTCAGTGGATTCTTCCAGCGTCATTTT
GGAAAGGAGGTTGTTGACTATCTAATTGACCCTTTTGTTGCTGGAATGTGTGGTGGTGAT
CCTGACTCGCTTTCAATGCACCATTCATTTCCAGAGTTGTGGAATTTAGAGAAAAGGTTT
GGCTCAGTCATACTTGGAGCTATTCGATCTAAGTTATCCCCTAAAAATGAAAAGAAGCAA
GGGCCACCCAAAACTTCAGCAAATAAGAAGCGCCAGCGGGGATCTTTTTCCTTTTTGGGC
GGAATGCAAACACTTACTGATGCAATATGCAAAGATCTCAGAGAAGATGAACTTAGACTA
AACTCTAGAGTTCTGGAATTATCTTGTAGCTGTACTGAGGACTCTGCGATAGATAGCTGG
TCAATTATTTCTGCCTCTCCACACAAAAGGCAATCAGAAGAAGAATCATTTGATGCTGTA
ATTATGACGGCCCCACTCTGTGATGTTAAGAGTATGAAGATTGCTAAGAGAGGAAATCCA
TTTCTACTCAACTTTATTCCTGAGGTTGATTATGTACCGCTATCTGTTGTTATAACCACA
TTTAAGAGGGAAAACGTAAAGTATCCCCTTGAGGGTTTTGGGGTTCTTGTACCTTCCAAG
GAGCAACAACATGGTCTCAAGACACTAGGCACCCTCTTCTCTTCTATGATGTTTCCAGAT
CGGGCACCAAACAATGTTTATCTCTATACTACTTTTGTTGGTGGAAGCCGAAATAGAGAA
CTTGCAAAAGCCTCAAGGACTGAGCTGAAAGAGATAGTAACTTCTGACCTTAAGCAGCTG
TTGGGTGCTGAGGGAGAGCCAACATATGTGAATCATCTATACTGGAGTAAAGCATTTCCA
TTGTACGGGCATAACTATGATTCAGTCCTAGATGCAATTGACAAAATGGAGAAAAATCTT
CCTGGATTATTCTATGCAGGTAACCACAGGGGGGGATTGTCAGTTGGCAAAGCATTATCT
TCTGGATGCAATGCAGCTGATCTTGTTATATCATATCTTGAATCCGTCTCAACTGACTCC
AAAAGACATTGCTGA

Peptide Sequence

PEP ID

XP_016496870.1
PEP Infomation

PREDICTED: protoporphyrinogen oxidase, mitochondrial [Nicotiana tabacum]
Sequence

MAPSAGEDKHSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGL
IWDEGANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSN
FLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGMCGGD
PDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLG
GMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAV
IMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSK
EQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQL
LGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALS
SGCNAADLVISYLESVSTDSKRHC

Transcript Sequence

Gene sequence data has not been registered.